Dr. Deepak Singla

Name: Dr. Deepak Singla Designation: Senior Scientist (Bioinformatics) ICAR-NBAIM Professional experience: 11 Years Research interest: Analysis of High throughput genomics, transcriptomics, and metagenome data Development of Machine learning, databases and software development Integrative Omics approach for mining gene of agricultural importance. Google Scholar Link: https://scholar.google.com/citations user=b80ifssAAAAJ&hl=en Contact details: Office Address: Molecular Biology Laboratory, ICAR-NBAIM, MAU E-mail: deepak.singla83@icar.org.in

Significant recognition (Awards/Fellowships/Technologies transferred/Patents etc.):

1. Awards

1. 1. CSIR-International Travel Award, NGBT Travel Award

2. Fellowships:

1. 1. CSIR-SRF, DST-NPDF (Not Availed)

3. Ongoing projects:

4. Completed projects:

5. Publications (no.s):

List of publications (Best 10 publications) with NAAS Rating and Impact Factor:

1. Sharma S., Bishnoi R., Jain R., Singla D* (2025): LSDVvac: An immunoinformatics database for vaccine design against lumpy skin disease virus. Comput. Biol. Med.190:110077. *Corresponding author (NAAS Rating:10.3, IF: 6.3)
2. Kumar P., Bishnoi R.,Priyadarshini P., Chhuneja P., Singla D* (2025): Understanding the structural basis of ALS mutations associated with resistance to sulfonylurea in wheat. Sci. Rep. 15(1):12855. *Corresponding author (NAAS Rating: 9.80, IF: 3.9)
3. Ramesh GV., Kaur J.,Singla D., Chhuneja P., Saharan A., Gangwar OP., Bala R., Mir RR., and Tak PS (2025): Use of Field pathogenomics approach for Puccinia striiformis f. sp. tritici race identification and phylogenomic delineation in North India.  World J. Microbiol. Biotechnol., 41:10.1007/s11274-025-04391-x. (NAAS Rating: 10.00, IF: 4.2)
4. Patel E., Kumar P.,Priyadarshini P., Singla D*., Sandhu JS* (2024): Molecular docking and dynamic simulation studies of isoflavones inhibiting Lox-2 activity for reducing beany flavor in soybean seeds. J. Biomol. Struct. Dyn.42 (23) 13334-13343. *Corresponding author (NAAS Rating: 8.70, IF:2.4)
5. Kaur S., Bishnoi R.,Priyadarshini P., Singla D*., and Chhuneja P (2023): DSP: database of disease susceptibility genes in plants. Funct. Integr. Genomics23(3) 10.1007/s10142-023-01132-x. *Corresponding author (NAAS Rating: 9.90, IF: 3.1)
6. Singla D*., Yadav IS (2022): GAAP: A GUI-based Genome Assembly and Annotation Package. Curr. Genomics 23(2) 77-82. *Corresponding author (NAAS Rating:7.80, IF: 1.4)
7. Yadav AK., Singla D.,* (2020): VacPred: SequenceBased Prediction of Plant Vacuole Proteins using Machine-learning Techniques. J. Biosci. 45 1-9. *Corresponding author (NAAS Rating: 8.10, IF: 1.9)
8. Fourati S et al.(2018): A crowd sourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection. Nat. Comm.9 10.1038/s41467-018-06735-8.(NAAS Rating: 20.0, IF: 15.7)
9. Iquebal MA., Soren KR., Gangwar P., Shanmugavadevel PS., Kumar A., Singla D., JaiswalS.,Chaturvedi SK., Singh NP., Varshney RK., Rai A., Kumar D (2017): Discovery of putative herbicide resistance genes and its regulatory network in chickpea using transcriptome sequencing. Front. Plant Sci.810.3389/fpls.2017.00958 (NAAS Rating:10.10, IF: 4.8)
10. Iquebal MA., TomarRS., Parakhia MV., Singla D., Jaiswal S., Rathod VM., Padiyar SR,Kumar N., Rai A., Kumar D (2017): Draft whole genome sequence of groundnut stem rot fungus Athelia rolfsii revealing genetic architect of its pathogenicity and virulence. Sci Rep.7 10.1038/s41598-017-05478-8.(NAAS Rating: 9.80, IF: 3.9)